Eighteen-year-old Charlie West can’t remember the last year of his life. He only knows the police are pursuing him for the murder of his best friend, Alex, and a ruthless group of terrorists called the Homelanders want him. Charlie searches for a man named Waterman, who can tell him the truth about his past. When Charlie and Waterman meet, Waterman and his cohort shoot Charlie with a tranquilizer, shove him in the trunk of a car and drag him to a remote location in the woods. There, at an old former psychiatric facility, they tell him they need to be sure they can still trust him. They inject him with a drug to restore his memory. During this painful process, Charlie has the first of many intermittent out-of-body experiences that allow him to relive his memories a little at a time.
He wakes up locked in the facility’s panic room, hearing the terrorists outside planning to blow up the building. He follows Waterman’s clue written on a note and escapes from the room, only to find Waterman’s dead body nearby. Waterman’s body position directs Charlie to a small robotic device that allows him to remotely tear gas the terrorists (who are led by a man named Waylon) and escape. Charlie is caught by and escapes the terrorists several times on a gunfire-filled chase through the woods.
Meanwhile, Charlie continues to remember elements of his past. A year ago, Waterman approached him secretly. He told Charlie the Homelanders were a great risk to national security, and he wanted to enlist Charlie to help him infiltrate the group. With Charlie’s permission, Waterman’s people would frame Charlie for the murder of his friend, Alex. Sherman, a teacher-turned-Homelander from the boys’ school, actually killed Alex. Waterman would then help Charlie escape from prison, and Charlie would gain credibility with the terrorists. He would have to give up everything, including his family, his girlfriend and the hope of a normal future. But God-fearing, patriotic Charlie realized he needed to do it to preserve the freedom of his country. As more memories come back, he thinks something must have gone wrong with the plan. That’s why the terrorists are after him, and that’s why his memory was gone. He had obviously consumed the drug provided by Waterman’s group to erase his memory in emergency circumstances.
Police learn Charlie’s whereabouts and pursue him in hopes of re-arresting him. The lead officer is Detective Rose, who initially arrested Charlie for Alex’s murder. Charlie is ill and weak with hunger and exhaustion. He finds a house in the woods and passes out just as a woman, Margaret, and her young son, Larry, come home. Margaret nurses Charlie back to health and hides him from the police. She’s heard him talking in his sleep and knows the truth about his identity. Charlie has a dream in which he discovers Rose is the man Waterman wanted him to contact. The Homelanders surround Margaret’s house, but Rose and his men arrive just in time to save Charlie, Margaret and Larry. Rose handcuffs Charlie to take him back to prison, and Charlie hopes he is right in thinking Rose is an ally. The series concludes with the next book in this series, book 4, The Final Hour.